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Genetic diversity of coronaviruses in Miniopterus fuliginosus bats

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Du Jiang 1   Yang Li 1   Ren Xianwen 1   Zhang Junpeng 2   Dong Jie 1   Sun Lilian 1   Zhu Yafang 1   Yang Fan 1   Zhang Shuyi 3   Wu Zhiqiang 1 *   Jin Qi 4 *  
文摘 Coronaviruses, such as severe acute respiratory syndrome coronavirus and Middle East respiratory syndrome coronavirus, pose significant public health threats. Bats have been suggested to act as natural reservoirs for both these viruses, and periodic monitoring of coronaviruses in bats may thus provide important clues about emergent infectious viruses. The Eastern bent-wing bat Miniopterus fuliginosus is distributed extensively throughout China. We therefore analyzed the genetic diversity of coronaviruses in samples of M. fuliginosus collected from nine Chinese provinces during 2011–2013. The only coronavirus genus found was Alphacoronavirus. We established six complete and five partial genomic sequences of alphacoronaviruses, which revealed that they could be divided into two distinct lineages, with close relationships to coronaviruses in Miniopterus magnater and Miniopterus pusillus. Recombination was confirmed by detecting putative breakpoints of Lineage 1 coronaviruses in M. fuliginosus and M. pusillus (Wu et al., 2015), which supported the results of topological and phylogenetic analyses. The established alphacoronavirus genome sequences showed high similarity to other alphacoronaviruses found in other Miniopterus species, suggesting that their transmission in different Miniopterus species may provide opportunities for recombination with different alphacoronaviruses. The genetic information for these novel alphacoronaviruses will improve our understanding of the evolution and genetic diversity of coronaviruses, with potentially important implications for the transmission of human diseases.
来源 Science China. Life Sciences ,2016,59(6):604-614 【核心库】
DOI 10.1007/s11427-016-5039-0
关键词 coronavirus ; Miniopterus fuliginosus ; bat ; co-infection ; recombination
地址

1. Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, MOH Key Laboratory of Systems Biology of Pathogens, Beijing, 100176  

2. Institute of Estuarine and Coastal Research, East China Normal University, State Key Laboratory of Estuarine and Coastal Research, Shanghai, 200062  

3. College of Animal Science and Veterinary Medicine, Shenyang Agricultural University, Shenyang, 110866  

4. Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, MOH Key Laboratory of Systems Biology of Pathogens;;Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Beijing, 100176

语种 英文
文献类型 研究性论文
ISSN 1674-7305
学科 基础医学
基金 the PUMC Youth Fund and Fundamental Research Funds for the Central Universities ;  from China, the National Natural Science Foundation of China ;  the National S&T Major Project ;  supported by the Program for Changjiang Scholars and Innovative Research Team in University of China
文献收藏号 CSCD:5712853

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引证文献 3 篇

1 Zou Xiaohui Simultaneous virus identification and characterization of severe unexplained pneumonia cases using a metagenomics sequencing technique Science China. Life Sciences,2017,60(3):279-286
CSCD被引 5 次

2 Obameso Joseph O The persistent prevalence and evolution of cross-family recombinant coronavirus GCCDC1 among a bat population: a two-year follow-up Science China. Life Sciences,2017,60(12):1357-1363
CSCD被引 1 次

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