Analysis of expressed sequence tags (ESTs) from a normalized cDNA library and isolation of EST simple sequence repeats from the invasive cotton mealybug Phenacoccus solenopsis
查看参考文献43篇
|
文摘
|
The cottonmealybug, Phenacoccus solenopsis Tinsley, is a serious and invasive pest. At present, genetic resources for studying P. solenopsis are limited, and this negatively affects genetic research on the organism and, consequently, translational work to improve management of this pest. In the present study, expressed sequence tags (ESTs) were analyzed from a normalized complementary DNA library of P. solenopsis. In addition, EST-derived microsatellite loci (also known as simple sequence repeats or SSRs) were isolated and characterized. A total of 1107 high-quality ESTs were acquired from the library. Clustering and assembly analysis resulted in 785 unigenes, which were classified functionally into 23 categories according to the Gene Ontology database. Seven EST-based SSR markers were developed in this study and are expected to be useful in characterizing how this invasive species was introduced, as well as providing insights into its genetic microevolution. |
|
来源
|
Insect Science
,2015,22(6):761-767 【核心库】
|
|
DOI
|
10.1111/1744-7917.12181
|
|
关键词
|
expressed sequence tags
;
microsatellite marker
;
normalized cDNA library
;
Phenacoccus solenopsis
|
|
地址
|
1.
College of Agronomy and Plant Protection, Qingdao Agricultural University, Key Lab of Integrated Crop Pest Management of Shandong Province, Shandong, Qingdao
2.
Shenyang Entry-Exit Inspection and Quarantine Bureau, Shenyang
3.
College of Agronomy and Plant Protection, Qingdao Agricultural University, Key Lab of Integrated Crop Pest Management of Shandong Province;;State Key Laboratory for Biology of Plant Diseases and Insect Pests, Shandong, Qingdao
|
|
语种
|
英文 |
|
文献类型
|
研究性论文 |
|
ISSN
|
1672-9609 |
|
学科
|
遗传学 |
|
基金
|
the Taishan Mountain Scholar Constructive Engineering Foundation of Shandong, and the Shandong Modern Agricultural Technology & Industry System
;
the Science and Technology Development Planning Program of Qingdao
;
supported by the National Science and Technology Support Program
|
|
文献收藏号
|
CSCD:5582479
|
参考文献 共
43
共3页
|
|
1.
Abbas G. The impact of some environmental factors on the fecundity of Phenacoccus solenopsis Tinsley (Hemiptera: Pseudococcidae): A serious pest of cotton and other crops.
Pakistan Journal of Agricultural Sciences,2010,47:321-325
|
被引
1
次
|
|
|
|
|
2.
Afzal M B S. Cross-resistance, the stability of acetamiprid resistance and its effect on the biological parameters of cottonmealybug, Phenacoccus solenopsis (Homoptera: Pseudococcidae), in Pakistan.
Pest Management Science,2014
|
被引
1
次
|
|
|
|
|
3.
Al Adawi A O. Aetiology and causal agents of mango sudden decline disease in the Sultanate of Oman.
European Journal of Plant Pathology,2006,116:247-254
|
被引
1
次
|
|
|
|
|
4.
Ashburner M. Gene Ontology: tool for the unification of biology.
Nature Genetics,2000,25:25-29
|
被引
755
次
|
|
|
|
|
5.
Arif M I. Host plants of cotton mealybug (Phenacoccus solenopsis): a new menace to cotton agroecosystem of Punjab.
International Journal of Agriculture and Biology,2009,11:163-167
|
被引
27
次
|
|
|
|
|
6.
Baum J A. Control of coleopteran insect pests throughRNAinterference.
Nature Biotechnology,2007,25:1322-1326
|
被引
154
次
|
|
|
|
|
7.
Bastide M. Assembling genomic DNA sequences with PHRAP.
Current Protocols in Bioinformatics,2007,17:11.4.1-11.4.15
|
被引
2
次
|
|
|
|
|
8.
Bradfield J Y. Cytochrome P450 family 4 in a cockroach: molecular cloning and regulation by regulation by hypertrehalosemic hormone.
Proceedings of the National Academy of Sciences of the United States of America,1991,88:4558-4562
|
被引
10
次
|
|
|
|
|
9.
Chu D. Sequence analysis of mtDNA COI gene and molecular phylogeny of different geographical populations of Bemisia tabaci (Gennadius).
Scientia Agricultura Sinica,2005,38:76-85
|
被引
4
次
|
|
|
|
|
10.
Chu D. Evidence for rapid spatiotemporal changes in genetic structure of an alien whitefly during initial invasion.
Scientific Reports,2014,4:4396
|
被引
4
次
|
|
|
|
|
11.
Claudianos C. A deficit of detoxification enzymes: pesticide sensitivity and environmental response in the honeybee.
Insect Molecular Biology,2006,15:615-636
|
被引
47
次
|
|
|
|
|
12.
Dhawan A K. Persistence and residual toxicity of some insecticides against Phenacoccus solenopsis on cotton (Gossypium spp.).
Indian Journal of Agricultural Sciences,2009,79:203-206
|
被引
2
次
|
|
|
|
|
13.
Ding J T. Studies on impact of high temperature and relative humidity on survival rates of Phenacoccus solenopsis Tinsley.
Journal of Xinjiang Agricultural University,2013,36:387-390
|
被引
1
次
|
|
|
|
|
14.
Ewing B. Base-calling of automated sequencer traces using phred. II. Error probabilities.
Genome Research,1998,8:186-194
|
被引
70
次
|
|
|
|
|
15.
Ho E C H. Gene discovery and transcript analyses in the corn smut pathogen Ustilago maydis: expressed sequence tag and genome sequence comparison.
BMC Genomics,2007,8:334
|
被引
3
次
|
|
|
|
|
16.
Hanazawa M. Use of cDNA subtraction and RNA interference screens in combination reveals genes required for germline development in Caenorhabditis elegans.
Proceedings of the National Academy of Sciences of the United States of America,2001,98:8686-8691
|
被引
2
次
|
|
|
|
|
17.
Huang K. The occurrence situation and control countermeasure of Phenacoccus solenopsis Tinsley in Funing county.
Biological Disaster Science,2012,35:303-307
|
被引
1
次
|
|
|
|
|
18.
Kanehisa M. KEGG: kyoto encyclopedia of genes and genomes.
Nucleic Acids Research,2000,28:27-30
|
被引
584
次
|
|
|
|
|
19.
Kosztarab M.
Scale Insects of Northeastern North America: Identification, Biology, and Distribution,1996:499-501
|
被引
3
次
|
|
|
|
|
20.
Kumar S. Life table of Phenacoccus solenopsis Tinsley (Pseudococcidae: Hemiptera) on various phenological stages of cotton.
African Journal of Agricultural Research,2013,8:1669-1676
|
被引
1
次
|
|
|
|
|
了解气象卫星更多信息，请访问