云南南部不同种源地小桐子遗传多样性的ISSR分析
Genetic Diversity of Jatropha curcas (Euphorbiaceae) Collected from Southern Yunnan, Detected by Inter-simple Sequence Repeat (ISSR)
查看参考文献16篇
文摘
|
应用ISSR分子标记方法对采自云南的8个居群的小桐子(Jatropha curcas)共158个个体进行遗传多样性分析。8个ISSR引物共扩增到了67个位点,其中61个是多态性位点。分析结果表明:(1)云南小桐子的遗传多样性水平很高。在物种水平上,平均每个位点的多态位点百分率PPB=91.04%,有效等位基因数Ne=1.5244,Nei’s基因多样性指数垃=0.3070,Shannon多样性信息指数Ho=0.4618;在居群水平上,PPB=55.04%,N_e=1.3826,H_e=0.2171,Shannon多样性信息指数Ho=0.3178。(2)居群间的遗传分化低于居群内的遗传分化。基于Nei’s遗传多样性分析得出的居群间遗传多样性分化系数Gst=0.2944。AMOVA分析显示:云南小桐子的遗传变异主要存在于居群内,占总变异的63.50%,居群间的遗传变异占36.50%。(3)居群间的地理距离及遗传一致度并不存在相关性。鉴于以上指标,我们推测云南小桐子可能来自不同的地区。 |
其他语种文摘
|
The genetic diversity of 158 individuals from eight semi-wild populations from Yunnan Province was estimated using ISSR method (8 primers). The results revealed an extraordinarily high level of genetic diversity (at species level, percentage of polymorphic loci PPB = 91.04%, effective number of alleles N_e = 1.5244, Nei's (1973) gene diversity He =0.3070, and Shannon's information index Ho =0.4618; at population level, PPB = 55.04%, Ne = 1.3826, Nei's (1973) gene diversity H_e = 0.2171, and Shannon's information index Ho = 0.3178). The level of genetic differentiation between populations is lower than that among populations. The low level of genetic differentiation among populations was detected, based on Nei's genetic diversity analysis (29.44%), and AMOVA (36.50%). ]here is no associations between geographical distance and genetic identity. We suggest that Jatropha curcas of Yunnan Province might not be introduced from the same place. |
来源
|
云南植物研究
,2007,29(6):619-624 【核心库】
|
关键词
|
小桐子
;
遗传变异
;
ISSR
|
地址
|
1.
中国科学院昆明植物研究所, 云南, 昆明, 650204
2.
中国科学院西双版纳热带植物园, 云南, 勐腊, 666303
|
语种
|
中文 |
文献类型
|
研究性论文 |
ISSN
|
0253-2700 |
学科
|
分子生物学 |
基金
|
国家科技基础条件平台建设项目
;
云南省自然科学基金
|
文献收藏号
|
CSCD:3042299
|
参考文献 共
16
共1页
|
1.
陈俊秋. 樟科濒危植物思茅木姜子遗传多样性的ISSR分析.
生物多样性,2006,14(5):410-420
|
被引
22
次
|
|
|
|
2.
邓传良. 长筒石蒜种质资源的RAPD及ISSR研究.
云南植物研究,2006,28(3):300-304
|
被引
14
次
|
|
|
|
3.
Excoffier L.
Analysis of Molecular Variance (AMOVA) Version 1.55,1993
|
被引
13
次
|
|
|
|
4.
Hamrick JL. Allozyme Diversity in Plant Species.
Plant Population Genetics,Breeding and Genetic Resources,1990:43-63
|
被引
37
次
|
|
|
|
5.
Heller. Physic Nut.Jatropha curcas L.,1996.Promoting the conservation and use of underutilized and neglected crops.1.
Institute of Plant Genetics and Crop Plant Research,Gatersleben/International Plant Genetic Resources Institute,Rome,1996:6-13
|
被引
1
次
|
|
|
|
6.
Huang JC. Genetic diversity and phylogenetic relationships of sweet potato and its wild relatives in Ipomoea series Batatas(Convovulaceae)as revealed by inter-simple sequence repeat(ISSR)and restriction analysis of chloroplast DNA.
Theoret Appl Genet,2000,100:1050-1060
|
被引
84
次
|
|
|
|
7.
Joshi SP. Genetic diversity and phylogenetic relationship as revealed by inter-simple sequence repeat(ISSR)polymorphism in the genus Oryza.
Theoret Appl Genet,2000,100:1311-1320
|
被引
112
次
|
|
|
|
8.
Karrin JD. A comparison of levels of genetic polymorphism and self-compability in geographically restricted and widespread plant congeners.
Evolut Ecol,1987,1:47-58
|
被引
4
次
|
|
|
|
9.
Kojima T. Genetic linkage map of ISSR and RAPD markers in Einkorn wheat in relation to that of RFLP markers.
Theoret Appl Genet,96:37-45
|
被引
1
次
|
|
|
|
10.
Nei M. Analysis of gene diversity in subdivided popudations.
Proceed Natl Academy Sci,1973,70:3321-3323
|
被引
573
次
|
|
|
|
11.
Nei M. Estimation of average heterozygosity and genetic distance from a small number of individuals.
Genetics,1978,89:583-590
|
被引
778
次
|
|
|
|
12.
杨淑达. 滇牡丹遗传多样性的ISSR分析.
生物多样性,2005,13(2):105-111
|
被引
37
次
|
|
|
|
13.
Yeh FC. POPGENE Version 1.31,Microsoft Windowbased Freeware for Population Genetic Analysis.
POPGENE Version 1.31,Microsoft Windowbased Freeware for Population Genetic Analysis,1999
|
被引
1
次
|
|
|
|
14.
张富民. 群体遗传学研究中的数据处理方法I. RAPD数据的AMOVA分析.
生物多样性,2002,10(4):438-444
|
被引
65
次
|
|
|
|
15.
张萍. 利用ISSR标记对新疆白梭梭居群的遗传多样性分析.
云南植物研究,2006,28(4):359-362
|
被引
9
次
|
|
|
|
16.
周晔. Identification of Polygonatum sibiricum and P.
cirrhifolium by ISSR,2006,12(2):178-180
|
被引
1
次
|
|
|
|
|